Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OTA19308.1 | OTA20696.1 | Xbed_02526 | Xbed_01228 | Glutamate synthase large chain. | Membrane protein. | 0.879 |
| OTA19308.1 | OTA21222.1 | Xbed_02526 | Xbed_00876 | Glutamate synthase large chain. | Aspartate aminotransferase. | 0.876 |
| OTA19308.1 | OTA21555.1 | Xbed_02526 | Xbed_00301 | Glutamate synthase large chain. | Pyoverdine synthetase D. | 0.873 |
| OTA19308.1 | OTA21991.1 | Xbed_02526 | Xbed_00240 | Glutamate synthase large chain. | Hypothetical protein. | 0.877 |
| OTA19308.1 | gcvP | Xbed_02526 | Xbed_00017 | Glutamate synthase large chain. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.859 |
| OTA19308.1 | gcvT | Xbed_02526 | Xbed_00019 | Glutamate synthase large chain. | Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine. | 0.877 |
| OTA19308.1 | mnmC | Xbed_02526 | Xbed_01468 | Glutamate synthase large chain. | Bifunctional tRNA -methyltransferase MnmD/FAD-dependent cmnm s U34 oxidoreductase MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.834 |
| OTA20696.1 | OTA19308.1 | Xbed_01228 | Xbed_02526 | Membrane protein. | Glutamate synthase large chain. | 0.879 |
| OTA20696.1 | OTA21222.1 | Xbed_01228 | Xbed_00876 | Membrane protein. | Aspartate aminotransferase. | 0.785 |
| OTA20696.1 | OTA21555.1 | Xbed_01228 | Xbed_00301 | Membrane protein. | Pyoverdine synthetase D. | 0.804 |
| OTA20696.1 | OTA21991.1 | Xbed_01228 | Xbed_00240 | Membrane protein. | Hypothetical protein. | 0.838 |
| OTA20696.1 | gcvP | Xbed_01228 | Xbed_00017 | Membrane protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.768 |
| OTA20696.1 | mnmC | Xbed_01228 | Xbed_01468 | Membrane protein. | Bifunctional tRNA -methyltransferase MnmD/FAD-dependent cmnm s U34 oxidoreductase MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.742 |
| OTA21222.1 | OTA19308.1 | Xbed_00876 | Xbed_02526 | Aspartate aminotransferase. | Glutamate synthase large chain. | 0.876 |
| OTA21222.1 | OTA20696.1 | Xbed_00876 | Xbed_01228 | Aspartate aminotransferase. | Membrane protein. | 0.785 |
| OTA21222.1 | OTA21555.1 | Xbed_00876 | Xbed_00301 | Aspartate aminotransferase. | Pyoverdine synthetase D. | 0.705 |
| OTA21222.1 | gcvP | Xbed_00876 | Xbed_00017 | Aspartate aminotransferase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.827 |
| OTA21222.1 | gcvT | Xbed_00876 | Xbed_00019 | Aspartate aminotransferase. | Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine. | 0.426 |
| OTA21222.1 | mnmC | Xbed_00876 | Xbed_01468 | Aspartate aminotransferase. | Bifunctional tRNA -methyltransferase MnmD/FAD-dependent cmnm s U34 oxidoreductase MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.771 |
| OTA21555.1 | OTA19308.1 | Xbed_00301 | Xbed_02526 | Pyoverdine synthetase D. | Glutamate synthase large chain. | 0.873 |
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